STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM26657.1Hypothetical protein. (251 aa)    
Predicted Functional Partners:
AFM25205.1
Hypothetical protein; PFAM: Domain of unknown function DUF39.
 
   
 0.811
AFM25884.1
PFAM: Domain of unknown function DUF39; TIGRFAM: putative methanogenesis marker 16 metalloprotein.
 
   
 0.805
AFM26656.1
TIGRFAM: phosphoesterase, MJ0936 family.
 
     0.804
AFM25207.1
NIL domain-containing protein,4Fe-4S protein; PFAM: NIL domain.
 
     0.785
AFM25882.1
Hypothetical protein; PFAM: Domain of unknown function DUF39.
 
   
 0.695
AFM26655.1
HIT family hydrolase, diadenosine tetraphosphate hydrolase; PFAM: HIT domain.
       0.679
AFM26654.1
Hypothetical protein.
       0.664
AFM23154.1
Hypothetical protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
  
     0.619
AFM26658.1
Hypothetical protein.
       0.438
AFM26653.1
PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; Belongs to the ribF family.
       0.418
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.