STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM26665.1Flp pilus assembly protein TadD; PFAM: Tetratricopeptide repeat. (691 aa)    
Predicted Functional Partners:
AFM25803.1
PFAM: Tetratricopeptide repeat.
 
 
 0.829
AFM24153.1
TPR repeat-containing protein; PFAM: Tetratricopeptide repeat; SEC-C motif.
 
 
 0.821
AFM23055.1
PFAM: Tetratricopeptide repeat.
 
 
 0.817
AFM24787.1
PFAM: Tetratricopeptide repeat.
 
 
 0.814
AFM25648.1
Hypothetical protein.
 
 
 0.778
AFM25470.1
Tfp pilus assembly protein PilF; PFAM: Tetratricopeptide repeat.
 
     0.776
AFM26667.1
Tetratricopeptide repeat protein.
 
 
0.776
AFM23895.1
PFAM: Tetratricopeptide repeat.
 
   
 0.774
AFM27043.1
PFAM: Tetratricopeptide repeat.
 
 
 0.772
AFM24228.1
PFAM: Tetratricopeptide repeat.
  
     0.768
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.