STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM26857.1PFAM: YeeE/YedE family (DUF395); TIGRFAM: putative selenium metabolism protein, YedE family. (365 aa)    
Predicted Functional Partners:
AFM26858.1
Putative redox protein, regulator of disulfide bond formation; PFAM: SirA-like protein; Belongs to the sulfur carrier protein TusA family.
 
  
 0.953
AFM26860.1
Putative sugar kinase; PFAM: Carbohydrate kinase.
 
    0.908
AFM26859.1
PFAM: Protein of unknown function (DUF3343).
 
    0.905
AFM24283.1
Selenium metabolism protein YedF; PFAM: SirA-like protein; DsrE/DsrF-like family; TIGRFAM: selenium metabolism protein YedF; Belongs to the sulfur carrier protein TusA family.
 
  
 0.831
AFM27017.1
PFAM: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); TIGRFAM: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; Contains selenocysteine; manually curated.
  
     0.588
AFM27012.1
Fatty acid/phospholipid biosynthesis enzyme; PFAM: Fatty acid synthesis protein.
  
     0.576
AFM27018.1
PFAM: Glycine/sarcosine/betaine reductase component B subunits.
  
     0.566
AFM25679.1
Putative redox protein, regulator of disulfide bond formation; PFAM: SirA-like protein; Belongs to the sulfur carrier protein TusA family.
  
  
 0.565
AFM27528.1
Putative redox protein, regulator of disulfide bond formation; PFAM: SirA-like protein; Belongs to the sulfur carrier protein TusA family.
  
  
 0.565
AFM27014.1
PFAM: Glycine reductase complex selenoprotein A; Contains selenocysteine; manually curated.
  
     0.554
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.