STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM26896.1PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; Contains selenocysteine; manually curated. (142 aa)    
Predicted Functional Partners:
AFM26895.1
FAD binding protein,4Fe-4S protein; PFAM: Pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S binding domain.
 
 0.981
AFM26898.1
PFAM: Pyridine nucleotide-disulphide oxidoreductase.
 
 0.981
AFM26498.1
FAD binding protein.
 
 0.976
AFM24156.1
FAD binding protein.
 
 0.974
AFM24623.1
Polyferredoxin, heterodixulfide reductase subunit A; PFAM: Pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S binding domain; Contains selenocysteine; manually curated.
 
 0.956
AFM22915.1
PFAM: Pyridine nucleotide-disulphide oxidoreductase.
 
 0.944
AFM26894.1
Heterodisulfide reductase, subunit B; PFAM: Cysteine-rich domain.
 
 
 0.943
AFM25172.1
PFAM: Pyridine nucleotide-disulphide oxidoreductase.
 
 0.913
AFM22760.1
PFAM: Cysteine-rich domain; TIGRFAM: CoB--CoM heterodisulfide reductase, subunit B.
 
 
 0.904
AFM27640.1
Heterodisulfide reductase, subunit B; PFAM: Cysteine-rich domain.
 
 
 0.902
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.