STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM26917.1PFAM: DsrE/DsrF-like family. (115 aa)    
Predicted Functional Partners:
AFM26914.1
Peroxiredoxin; PFAM: AhpC/TSA family.
 
     0.622
AFM26918.1
Multimeric flavodoxin WrbA; PFAM: NADPH-dependent FMN reductase.
       0.561
AFM23613.1
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family.
  
     0.556
AFM26913.1
PFAM: Redoxin.
 
     0.536
AFM27211.1
PAS domain S-box; PFAM: Bacterial regulatory proteins, luxR family; TIGRFAM: PAS domain S-box.
  
     0.482
AFM23242.1
Hypothetical protein.
  
     0.476
AFM25593.1
Uncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein; PFAM: Carboxymuconolactone decarboxylase family.
 
     0.463
AFM26916.1
Hypothetical protein.
       0.445
AFM27631.1
Molybdopterin converting factor, large subunit; PFAM: MoaE protein.
  
     0.419
AFM26915.1
Hypothetical protein.
       0.410
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.