STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM26985.1Di-/tricarboxylate transporter; PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter. (491 aa)    
Predicted Functional Partners:
AFM26986.1
CBS domain-containing protein; PFAM: CBS domain.
 
     0.903
AFM27071.1
CBS-domain-containing membrane protein; PFAM: CBS domain.
 
     0.761
AFM24254.1
CBS domain-containing protein; PFAM: CBS domain.
 
     0.713
AFM24450.1
Putative permease; PFAM: Sulfite exporter TauE/SafE.
 
    0.691
AFM26984.1
Na+/H+ antiporter NhaD-like permease; PFAM: Citrate transporter.
     
 0.647
AFM26980.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
 
     0.629
AFM27077.1
PFAM: His Kinase A (phosphoacceptor) domain.
  
     0.605
AFM24449.1
Hypothetical protein.
  
     0.584
AFM23242.1
Hypothetical protein.
 
     0.581
AFM24774.1
Putative permease; PFAM: Sulfite exporter TauE/SafE.
 
    0.499
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.