STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM27103.1Putative lipoprotein involved in nitrous oxide reduction; PFAM: NosL. (176 aa)    
Predicted Functional Partners:
AFM23395.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
     0.792
AFM23397.1
Hypothetical protein.
 
     0.792
AFM23386.1
Parallel beta-helix repeat (two copies); PFAM: Periplasmic copper-binding protein (NosD); TIGRFAM: parallel beta-helix repeat (two copies).
  
 
 0.764
AFM27102.1
PFAM: Adenylate and Guanylate cyclase catalytic domain; HAMP domain.
       0.709
AFM23390.1
ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
 
 0.680
AFM27754.1
PFAM: Domain of unknown function (DUF3526).
  
 
 0.680
AFM25650.1
CcmB protein.
  
 
 0.676
AFM27753.1
PFAM: Domain of unknown function (DUF3526).
  
 
 0.676
AFM23396.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
 
     0.628
AFM27104.1
Putative lipoprotein involved in nitrous oxide reduction; PFAM: NosL.
 
    
0.621
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.