STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM27143.1Hypothetical protein; PFAM: FMN-binding domain. (347 aa)    
Predicted Functional Partners:
AFM24157.1
Polyferredoxin, heterodixulfide reductase subunit A; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; 4Fe-4S binding domain.
  
 
 0.945
AFM26499.1
Putative adenylylsulfate reductase-associated electron transfer protein QmoB; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit.
  
 
 0.945
AFM27144.1
PFAM: NapC/NirT cytochrome c family, N-terminal region.
  
  
 0.792
AFM27145.1
Hypothetical protein.
       0.773
AFM27146.1
Hypothetical protein.
       0.687
AFM22916.1
PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; 4Fe-4S binding domain.
  
 
 0.626
AFM22762.1
Polyferredoxin, heterodixulfide reductase subunit A; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Methyl-viologen-reducing hydrogenase, delta subunit; 4Fe-4S binding domain.
  
 
 0.625
AFM25171.1
PFAM: Methyl-viologen-reducing hydrogenase, delta subunit.
  
 
 0.625
AFM27147.1
Succinate dehydrogenase/fumarate reductase flavoprotein subunit; PFAM: FAD binding domain.
       0.502
AFM27150.1
PFAM: Polysulphide reductase, NrfD.
     
 0.403
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.