STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM27146.1Hypothetical protein. (258 aa)    
Predicted Functional Partners:
AFM22977.1
PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit; TIGRFAM: CO dehydrogenase/CO-methylating acetyl-CoA synthase complex, beta subunit.
  
 
 0.960
AFM22978.1
PFAM: Prismane/CO dehydrogenase family; CO dehydrogenase/acetyl-CoA synthase delta subunit; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit.
  
 
 0.939
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
   
 
 0.898
AFM27147.1
Succinate dehydrogenase/fumarate reductase flavoprotein subunit; PFAM: FAD binding domain.
 
     0.897
AFM26894.1
Heterodisulfide reductase, subunit B; PFAM: Cysteine-rich domain.
 
   
 0.740
AFM27640.1
Heterodisulfide reductase, subunit B; PFAM: Cysteine-rich domain.
 
   
 0.737
AFM26893.1
Hypothetical protein.
 
     0.709
AFM26900.1
Hypothetical protein.
 
   
 0.708
AFM28168.1
PFAM: Methyl-viologen-reducing hydrogenase, delta subunit.
 
   
 0.699
AFM26899.1
PFAM: Methyl-viologen-reducing hydrogenase, delta subunit; Contains selenocysteine; manually curated.
 
   
 0.689
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.