STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM27217.1Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit; PFAM: Doubled CXXCH motif (Paired_CXXCH_1); TIGRFAM: doubled CXXCH domain. (401 aa)    
Predicted Functional Partners:
AFM27218.1
nitrate/TMAO reductase, membrane-bound tetraheme cytochrome c subunit; PFAM: NapC/NirT cytochrome c family, N-terminal region.
 
  
 0.900
AFM25183.1
Arylsulfatase A family protein; PFAM: Sulfatase.
 
   
 0.713
AFM25188.1
Arylsulfatase A family protein; PFAM: Sulfatase.
 
   
 0.709
AFM25182.1
Arylsulfatase A family protein; PFAM: Sulfatase.
 
   
 0.708
AFM25186.1
Arylsulfatase A family protein; PFAM: Sulfatase.
 
   
 0.683
AFM27667.1
Arylsulfatase A family protein; PFAM: Sulfatase.
 
   
 0.631
AFM24414.1
PFAM: Protein of unknown function (DUF1254); Protein of unknown function (DUF1214).
  
     0.594
AFM27216.1
Hypothetical protein.
       0.580
AFM25965.1
Hypothetical protein.
  
  
 0.569
AFM25187.1
Phosphoserine phosphatase.
 
     0.549
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.