STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM27352.1PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS. (394 aa)    
Predicted Functional Partners:
AFM25655.1
Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
 
 0.999
AFM27353.1
PFAM: NifU-like N terminal domain; TIGRFAM: FeS cluster assembly scaffold protein NifU, Clostridium type.
 
 0.998
AFM25679.1
Putative redox protein, regulator of disulfide bond formation; PFAM: SirA-like protein; Belongs to the sulfur carrier protein TusA family.
   
 0.986
AFM27528.1
Putative redox protein, regulator of disulfide bond formation; PFAM: SirA-like protein; Belongs to the sulfur carrier protein TusA family.
   
 0.986
AFM27289.1
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis; PFAM: MoeZ/MoeB domain; ThiF family.
   
 0.978
AFM24682.1
Iron-sulfur cluster biosynthesis protein, NifU-like protein; PFAM: NifU-like N terminal domain.
 
 0.974
AFM24676.1
Iron-sulfur cluster biosynthesis protein, NifU-like protein; PFAM: NifU-like N terminal domain.
 
 0.970
AFM23938.1
Iron-sulfur cluster biosynthesis protein, NifU-like protein; PFAM: NifU-like N terminal domain.
 
 0.969
AFM26858.1
Putative redox protein, regulator of disulfide bond formation; PFAM: SirA-like protein; Belongs to the sulfur carrier protein TusA family.
   
 0.963
AFM27455.1
Rhodanese-related sulfurtransferase; PFAM: Rubrerythrin; Rhodanese-like domain; Contains selenocysteine; manually curated.
  
 0.925
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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