STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM27353.1PFAM: NifU-like N terminal domain; TIGRFAM: FeS cluster assembly scaffold protein NifU, Clostridium type. (162 aa)    
Predicted Functional Partners:
AFM27352.1
PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS.
 
 0.998
AFM25654.1
Cysteine desulfurase NifS; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
 
 0.997
AFM26819.1
PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS.
 
 0.997
AFM25146.1
Cysteine desulfurase family protein; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.961
AFM23444.1
PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein.
  
 
 0.932
AFM24556.1
TIGRFAM: selenium-dependent molybdenum hydroxylase system protein, YqeB family; manually curated.
  
 
 0.928
AFM26661.1
PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein.
 
  
 0.891
AFM26847.1
PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein.
 
  
 0.891
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.852
dnaK-2
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.852
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.