STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM27405.1ATPase component of Mn/Zn ABC-type transporter; PFAM: ABC transporter. (238 aa)    
Predicted Functional Partners:
AFM27404.1
ABC-type Mn2+/Zn2+ transport system, permease component; PFAM: ABC 3 transport family.
 
 0.998
AFM27406.1
ABC-type metal ion transport system, periplasmic component/surface adhesin; PFAM: Periplasmic solute binding protein family.
 
 
 0.995
AFM26167.1
ABC-type Mn2+/Zn2+ transport system, permease component; PFAM: ABC 3 transport family.
 0.993
AFM26947.1
ABC-type Mn2+/Zn2+ transport system, permease component; PFAM: ABC 3 transport family; FeoA domain; Iron dependent repressor, metal binding and dimerisation domain.
 
 0.986
AFM26169.1
ABC-type metal ion transport system, periplasmic component/surface adhesin; PFAM: Periplasmic solute binding protein family; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.979
AFM27403.1
ABC-type metal ion transport system, periplasmic component/surface adhesin; PFAM: Periplasmic solute binding protein family.
 
  
 0.966
AFM26168.1
ATPase component of Mn/Zn ABC-type transporter; PFAM: ABC transporter.
  
  
 
0.921
AFM26950.1
ABC-type metal ion transport system, periplasmic component/surface adhesin; PFAM: Periplasmic solute binding protein family; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.905
AFM27407.1
Hypothetical protein.
  
    0.865
AFM25158.1
ABC-type uncharacterized transport system, ATPase component; PFAM: ABC transporter.
 
     0.553
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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