STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM27761.1Iron-only hydrogenase maturation protein HydG; PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: [FeFe] hydrogenase H-cluster radical SAM maturase HydG; thiazole biosynthesis protein ThiH. (473 aa)    
Predicted Functional Partners:
AFM27757.1
Iron-only hydrogenase maturation protein HydF; PFAM: GTPase of unknown function; TIGRFAM: [FeFe] hydrogenase H-cluster maturation GTPase HydF; small GTP-binding protein domain.
  
 0.986
thiE
Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
 
  
 0.940
AFM27762.1
TIGRFAM: putative iron-only hydrogenase system regulator.
 
   
 0.904
AFM26217.1
PFAM: Response regulator receiver domain; Stage II sporulation protein E (SpoIIE).
  
  
 0.892
AFM27758.1
Iron-only hydrogenase maturation rSAM protein HydE; PFAM: Radical SAM superfamily; TIGRFAM: [FeFe] hydrogenase H-cluster radical SAM maturase HydE.
 
  
0.883
AFM23217.1
PFAM: Stage II sporulation protein E (SpoIIE).
  
  
 0.877
AFM23823.1
PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS.
  
  
 0.877
AFM23482.1
PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC.
 
  
 0.873
AFM27034.1
Hydroxymethylpyrimidine synthase; PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC.
 
  
 0.868
AFM27764.1
Hydrogenase, Fe-only; PFAM: Iron only hydrogenase large subunit, C-terminal domain; TIGRFAM: [FeFe] hydrogenase, group A.
 
   
 0.868
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.