STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM27776.1PFAM: Serpin (serine protease inhibitor); Belongs to the serpin family. (469 aa)    
Predicted Functional Partners:
AFM24131.1
PFAM: Domain of unknown function (DUF3458); Peptidase family M1.
   
 0.786
AFM22869.1
Large extracellular alpha-helical protein; PFAM: Alpha-macro-globulin thiol-ester bond-forming region; Alpha-2-macroglobulin family; MG2 domain; Alpha-2-macroglobulin family N-terminal region.
  
 0.603
AFM24804.1
PFAM: Protein kinase domain.
    
 0.594
AFM24117.1
PFAM: ATPase family associated with various cellular activities (AAA).
    
  0.553
AFM25452.1
PFAM: ATPase family associated with various cellular activities (AAA).
    
  0.553
AFM25473.1
PFAM: ATPase family associated with various cellular activities (AAA); Cell division protein 48 (CDC48), N-terminal domain; Belongs to the AAA ATPase family.
    
  0.553
AFM25530.1
PFAM: ATPase family associated with various cellular activities (AAA).
    
  0.553
AFM25961.1
PFAM: ATPase family associated with various cellular activities (AAA).
    
  0.553
AFM27551.1
AAA family ATPase, CDC48 subfamily; PFAM: Cell division protein 48 (CDC48), N-terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: AAA family ATPase, CDC48 subfamily; Belongs to the AAA ATPase family.
    
  0.553
AFM23425.1
Hypothetical protein.
   
 0.551
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.