STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM27828.1Multidrug resistance efflux pump. (342 aa)    
Predicted Functional Partners:
AFM27829.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
 0.967
AFM27830.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
 0.959
AFM27831.1
ABC-type multidrug transport system, permease component; Manually curated.
  
 0.928
AFM27832.1
ABC-type multidrug transport system, permease component.
  
 0.927
AFM26439.1
ABC-type multidrug transport system, permease component.
  
 0.820
AFM23830.1
PFAM: Outer membrane efflux protein.
 
 
 0.819
AFM25480.1
ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain; PFAM: ABC transporter transmembrane region; ABC transporter.
  
 
 0.732
AFM26138.1
PFAM: Peptidase C39 family; ABC transporter transmembrane region; ABC transporter; TIGRFAM: type I secretion system ABC transporter, HlyB family.
  
 
 0.732
AFM26440.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
 0.718
AFM23794.1
Hypothetical protein.
  
 
 0.714
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.