STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFM28064.1CBS domain-containing protein; PFAM: CBS domain. (298 aa)    
Predicted Functional Partners:
AFM28065.1
CBS-domain-containing membrane protein; PFAM: CBS domain.
 
     0.893
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
 0.684
AFM27628.1
Hypothetical protein; PFAM: Uncharacterised ArCR, COG2043.
  
     0.612
AFM28103.1
Putative thioesterase.
 
     0.542
AFM23679.1
Hypothetical protein.
  
     0.528
AFM25892.1
Putative transcriptional regulator; PFAM: Cupin domain; Helix-turn-helix.
 
   
 0.518
AFM23265.1
Hypothetical protein.
 
     0.515
AFM23072.1
Putative transcriptional regulator containing an HTH domain fused to a Zn-ribbon; PFAM: Sugar-specific transcriptional regulator TrmB.
  
     0.508
AFM24529.1
Hypothetical protein.
  
     0.503
AFM24293.1
Membrane protein involved in the export of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein.
 
     0.486
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.