STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSLN_LOCUS4625HMG box domain-containing protein. (474 aa)    
Predicted Functional Partners:
SSLN_LOCUS4924
Runt domain-containing protein.
   
 0.735
A0A183TFR3
Uncharacterized protein.
    
 0.702
SSLN_LOCUS8446
HMG box domain-containing protein.
    
 0.637
A0A183TM22
HMG box domain-containing protein.
    
 0.637
A0A3P7CRN0
HMG box domain-containing protein.
    
 0.637
SSLN_LOCUS4231
POU domain protein.
    
 0.611
SSLN_LOCUS2483
Uridine-cytidine kinase 2.
    
 0.586
SSLN_LOCUS847
Uncharacterized protein.
    
 0.586
SSLN_LOCUS7999
PRK domain-containing protein.
    
 0.586
A0A3P7ES87
Uncharacterized protein.
    
 0.586
Your Current Organism:
Schistocephalus solidus
NCBI taxonomy Id: 70667
Other names: S. solidus
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