STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSLN_LOCUS3552Uncharacterized protein. (681 aa)    
Predicted Functional Partners:
A0A183TF29
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.999
A0A183T7Z5
Uncharacterized protein.
   
 0.998
A0A183TI13
MAT1 domain-containing protein.
    
 0.996
SSLN_LOCUS4752
Uncharacterized protein.
    
 0.990
A0A183TN74
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.988
SSLN_LOCUS7726
Uncharacterized protein.
    
 0.987
A0A183TK48
Transcription initiation factor IIB.
    
 0.987
A0A183T9A4
TFIIE domain-containing protein.
   
 0.986
A0A183TD71
HTH TFE/IIEalpha-type domain-containing protein.
   
 0.986
A0A183TLV2
Helicase ATP-binding domain-containing protein.
    
 0.985
Your Current Organism:
Schistocephalus solidus
NCBI taxonomy Id: 70667
Other names: S. solidus
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