STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSLN_LOCUS3956Golgi to ER traffic protein 4 homolog B. (318 aa)    
Predicted Functional Partners:
SSLN_LOCUS361
ATPase ASNA1 homolog; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for ins [...]
    
 0.993
SSLN_LOCUS5156
Uncharacterized protein.
    
 0.989
A0A183T597
TPR_REGION domain-containing protein.
   
 0.974
SSLN_LOCUS2821
Uncharacterized protein.
    
 0.966
SSLN_LOCUS7903
Uncharacterized protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
    
   0.919
SSLN_LOCUS4146
Uncharacterized protein.
    
   0.919
A0A183TJC8
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
 0.720
SSLN_LOCUS1360
Ubiquitin-like domain-containing protein.
    
 0.674
SSLN_LOCUS1552
Uncharacterized protein.
    
 0.674
SSLN_LOCUS1802
Uncharacterized protein.
    
 0.674
Your Current Organism:
Schistocephalus solidus
NCBI taxonomy Id: 70667
Other names: S. solidus
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