STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSLN_LOCUS5762Uncharacterized protein. (762 aa)    
Predicted Functional Partners:
A0A183THB9
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.999
SSLN_LOCUS3845
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
   
 0.998
SSLN_LOCUS4531
zf-Sec23_Sec24 domain-containing protein.
 
 
0.996
A0A183T1G9
Uncharacterized protein.
   
0.996
SSLN_LOCUS8651
Sec16_C domain-containing protein.
   
 0.990
A0A183T6G9
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.874
SAR1B
GTP-binding protein SAR1b; Belongs to the small GTPase superfamily. SAR1 family.
   
 
 0.868
SSLN_LOCUS4936
Uncharacterized protein.
   
 0.860
SSLN_LOCUS7795
GRASP55_65 domain-containing protein.
   
 0.833
SSLN_LOCUS7698
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 
 0.828
Your Current Organism:
Schistocephalus solidus
NCBI taxonomy Id: 70667
Other names: S. solidus
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