STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSLN_LOCUS6168Uncharacterized protein. (182 aa)    
Predicted Functional Partners:
A0A183TG23
Uncharacterized protein.
    
 0.998
A0A183TE42
Macro domain-containing protein.
   
 0.986
A0A183TKS6
Histone H2A; Belongs to the histone H2A family.
   
 0.976
A0A3P7D7M4
TPR_REGION domain-containing protein.
    
 0.967
SSLN_LOCUS7308
Uncharacterized protein.
   
 
 0.931
SSLN_LOCUS9060
RuvB-like helicase; Belongs to the RuvB family.
    
 0.930
SSLN_LOCUS2608
RPOLD domain-containing protein.
    
 0.930
SSLN_LOCUS7683
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.920
SSLN_LOCUS1202
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
    
 
 0.902
SSLN_LOCUS4956
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.901
Your Current Organism:
Schistocephalus solidus
NCBI taxonomy Id: 70667
Other names: S. solidus
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.