Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SSLN_LOCUS8417UmuC domain-containing protein. (405 aa)    
Predicted Functional Partners:
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.960
A0A3P7CXX3
Uncharacterized protein.
  
0.952
SSLN_LOCUS5074
REV1_C domain-containing protein.
   
 0.942
SSLN_LOCUS7633
Uncharacterized protein.
     
  0.849
SSLN_LOCUS9276
DNA polymerase eta.
  
 0.838
SSLN_LOCUS9280
XPA_C domain-containing protein.
   
 0.823
SSLN_LOCUS9872
DNA repair protein RAD51 homolog; Binds to single and double-stranded DNA and exhibits DNA- dependent ATPase activity. Underwinds duplex DNA. Belongs to the RecA family. RAD51 subfamily.
  
 0.815
SSLN_LOCUS8620
Coronin; Belongs to the WD repeat coronin family.
 
 
    0.802
RL40
Ubiquitin-60S ribosomal protein L40.
    
  0.797
A0A183T386
DNA_pol_B_exo1 domain-containing protein.
   
 0.793
Your Current Organism:
Schistocephalus solidus
NCBI taxonomy Id: 70667
Other names: S. solidus
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