SSLN_LOCUS8432 protein (Schistocephalus solidus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SSLN_LOCUS8432

Rubis-subs-bind domain-containing protein. (473 aa)

Predicted Functional Partners:

A0A183TM52

0.809

SSLN_LOCUS4399

0.777

A0A3P7D5A3

0.768

SSLN_LOCUS4289

0.746

SSLN_LOCUS4290

0.746

SSLN_LOCUS4151

0.734

A0A183T3E5

0.690

A0A183T3Y7

0.681

A0A183T3V9

0.679

A0A183TBT9

0.679

Your Current Organism:

Schistocephalus solidus

NCBI taxonomy Id: 70667
Other names: S. solidus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183T3E5	A0A183T3V9	A0A183T3E5	A0A183T3V9	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits.	Uncharacterized protein.	0.998
A0A183T3E5	A0A183T3Y7	A0A183T3E5	A0A183T3Y7	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits.	Lipoyl-binding domain-containing protein.	0.996
A0A183T3E5	A0A183TBT9	A0A183T3E5	A0A183TBT9	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits.	Succinate-CoA ligase subunit beta.	0.999
A0A183T3E5	A0A183TM52	A0A183T3E5	A0A183TM52	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits.	ATP-grasp_2 domain-containing protein.	0.999
A0A183T3E5	A0A3P7D5A3	A0A183T3E5	A0A3P7D5A3	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits.	Uncharacterized protein.	0.924
A0A183T3E5	SSLN_LOCUS8432	A0A183T3E5	A0A183SW34	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits.	Rubis-subs-bind domain-containing protein.	0.690
A0A183T3V9	A0A183T3E5	A0A183T3V9	A0A183T3E5	Uncharacterized protein.	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits.	0.998
A0A183T3V9	A0A183T3Y7	A0A183T3V9	A0A183T3Y7	Uncharacterized protein.	Lipoyl-binding domain-containing protein.	0.953
A0A183T3V9	A0A183TM52	A0A183T3V9	A0A183TM52	Uncharacterized protein.	ATP-grasp_2 domain-containing protein.	0.787
A0A183T3V9	A0A3P7D5A3	A0A183T3V9	A0A3P7D5A3	Uncharacterized protein.	Uncharacterized protein.	0.700
A0A183T3V9	SSLN_LOCUS8432	A0A183T3V9	A0A183SW34	Uncharacterized protein.	Rubis-subs-bind domain-containing protein.	0.679
A0A183T3Y7	A0A183T3E5	A0A183T3Y7	A0A183T3E5	Lipoyl-binding domain-containing protein.	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits.	0.996
A0A183T3Y7	A0A183T3V9	A0A183T3Y7	A0A183T3V9	Lipoyl-binding domain-containing protein.	Uncharacterized protein.	0.953
A0A183T3Y7	A0A183TBT9	A0A183T3Y7	A0A183TBT9	Lipoyl-binding domain-containing protein.	Succinate-CoA ligase subunit beta.	0.989
A0A183T3Y7	A0A183TM52	A0A183T3Y7	A0A183TM52	Lipoyl-binding domain-containing protein.	ATP-grasp_2 domain-containing protein.	0.982
A0A183T3Y7	A0A3P7D5A3	A0A183T3Y7	A0A3P7D5A3	Lipoyl-binding domain-containing protein.	Uncharacterized protein.	0.751
A0A183T3Y7	SSLN_LOCUS8432	A0A183T3Y7	A0A183SW34	Lipoyl-binding domain-containing protein.	Rubis-subs-bind domain-containing protein.	0.681
A0A183TBT9	A0A183T3E5	A0A183TBT9	A0A183T3E5	Succinate-CoA ligase subunit beta.	Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits.	0.999
A0A183TBT9	A0A183T3Y7	A0A183TBT9	A0A183T3Y7	Succinate-CoA ligase subunit beta.	Lipoyl-binding domain-containing protein.	0.989
A0A183TBT9	A0A183TM52	A0A183TBT9	A0A183TM52	Succinate-CoA ligase subunit beta.	ATP-grasp_2 domain-containing protein.	0.956