Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSLN_LOCUS8442Uncharacterized protein. (1083 aa)    
Predicted Functional Partners:
SQSTM
Sequestosome-1.
   
 0.994
A0A183TQ89
SCP2 domain-containing protein.
  
 0.981
RS27A
Ubiquitin-40S ribosomal protein S27a.
   
  0.971
RL40
Ubiquitin-60S ribosomal protein L40.
   
  0.971
SSLN_LOCUS7729
Uncharacterized protein.
    
 0.970
A0A3P7CZQ1
Uncharacterized protein.
    
 0.970
A0A183TKS6
Histone H2A; Belongs to the histone H2A family.
   
 0.910
SSLN_LOCUS9726
Peptidylprolyl isomerase.
   
 0.902
SSLN_LOCUS8617
Uncharacterized protein.
   
 0.900
A0A183TG23
Uncharacterized protein.
    
 
 0.877
Your Current Organism:
Schistocephalus solidus
NCBI taxonomy Id: 70667
Other names: S. solidus
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