Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SSLN_LOCUS8620Coronin; Belongs to the WD repeat coronin family. (445 aa)    
Predicted Functional Partners:
A0A183TEX9
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
   
 
 0.881
SSLN_LOCUS3773
Uncharacterized protein.
    
   0.816
SSLN_LOCUS8417
UmuC domain-containing protein.
 
 
    0.802
A0A183TL70
eRF1_1 domain-containing protein.
   
   0.753
A0A183THD5
Uncharacterized protein.
      0.750
A0A183T8V5
DHFR domain-containing protein.
    
 0.742
A0A3P7CSR0
Mur_ligase_M domain-containing protein.
    
 0.719
A0A183T9Q9
Uncharacterized protein.
    
 0.716
A0A183TJU0
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
    
 0.710
SSLN_LOCUS4348
GTP_cyclohydroI domain-containing protein.
    
 0.662
Your Current Organism:
Schistocephalus solidus
NCBI taxonomy Id: 70667
Other names: S. solidus
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