A0A183T261 protein (Schistocephalus solidus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A183T261

Sepiapterin reductase. (344 aa)

Predicted Functional Partners:

SSLN_LOCUS61

0.974

SSLN_LOCUS32

0.973

A0A183T5T4

0.948

A0A183T8V5

0.935

A0A183TFV0

0.889

SSLN_LOCUS6011

0.878

A0A183TFB8

0.878

A0A183TK55

0.878

A0A183TBX4

0.863

SSLN_LOCUS6150

0.823

Your Current Organism:

Schistocephalus solidus

NCBI taxonomy Id: 70667
Other names: S. solidus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183T261	A0A183T5T4	A0A183T261	A0A183T5T4	Sepiapterin reductase.	BH4_AAA_HYDROXYL_2 domain-containing protein.	0.948
A0A183T261	A0A183T8V5	A0A183T261	A0A183T8V5	Sepiapterin reductase.	DHFR domain-containing protein.	0.935
A0A183T261	A0A183TBX4	A0A183T261	A0A183TBX4	Sepiapterin reductase.	BH4_AAA_HYDROXYL_2 domain-containing protein.	0.863
A0A183T261	A0A183TFB8	A0A183T261	A0A183TFB8	Sepiapterin reductase.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.878
A0A183T261	A0A183TFV0	A0A183T261	A0A183TFV0	Sepiapterin reductase.	Cytochrome b5 heme-binding domain-containing protein.	0.889
A0A183T261	A0A183TK55	A0A183T261	A0A183TK55	Sepiapterin reductase.	Carbonyl reductase [NADPH] 3; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.878
A0A183T261	SSLN_LOCUS32	A0A183T261	A0A183S734	Sepiapterin reductase.	Uncharacterized protein.	0.973
A0A183T261	SSLN_LOCUS6011	A0A183T261	A0A183SP63	Sepiapterin reductase.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.878
A0A183T261	SSLN_LOCUS61	A0A183T261	A0A183S763	Sepiapterin reductase.	Uncharacterized protein.	0.974
A0A183T261	SSLN_LOCUS6150	A0A183T261	A0A183SPK2	Sepiapterin reductase.	Thymidylat_synt domain-containing protein.	0.823
A0A183T5T4	A0A183T261	A0A183T5T4	A0A183T261	BH4_AAA_HYDROXYL_2 domain-containing protein.	Sepiapterin reductase.	0.948
A0A183T5T4	A0A183T8V5	A0A183T5T4	A0A183T8V5	BH4_AAA_HYDROXYL_2 domain-containing protein.	DHFR domain-containing protein.	0.947
A0A183T5T4	A0A183TBX4	A0A183T5T4	A0A183TBX4	BH4_AAA_HYDROXYL_2 domain-containing protein.	BH4_AAA_HYDROXYL_2 domain-containing protein.	0.902
A0A183T5T4	A0A183TFB8	A0A183T5T4	A0A183TFB8	BH4_AAA_HYDROXYL_2 domain-containing protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.434
A0A183T5T4	A0A183TK55	A0A183T5T4	A0A183TK55	BH4_AAA_HYDROXYL_2 domain-containing protein.	Carbonyl reductase [NADPH] 3; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.434
A0A183T5T4	SSLN_LOCUS32	A0A183T5T4	A0A183S734	BH4_AAA_HYDROXYL_2 domain-containing protein.	Uncharacterized protein.	0.966
A0A183T5T4	SSLN_LOCUS6011	A0A183T5T4	A0A183SP63	BH4_AAA_HYDROXYL_2 domain-containing protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.434
A0A183T5T4	SSLN_LOCUS61	A0A183T5T4	A0A183S763	BH4_AAA_HYDROXYL_2 domain-containing protein.	Uncharacterized protein.	0.443
A0A183T8V5	A0A183T261	A0A183T8V5	A0A183T261	DHFR domain-containing protein.	Sepiapterin reductase.	0.935
A0A183T8V5	A0A183T5T4	A0A183T8V5	A0A183T5T4	DHFR domain-containing protein.	BH4_AAA_HYDROXYL_2 domain-containing protein.	0.947