STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A183T9F8Uncharacterized protein. (448 aa)    
Predicted Functional Partners:
SSLN_LOCUS5639
CPSF_A domain-containing protein.
    
 0.995
SSLN_LOCUS3620
Uncharacterized protein.
    
 0.992
A0A183T221
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.986
SSLN_LOCUS4424
Uncharacterized protein.
    
 
 0.969
A0A183TB80
TFIIS-type domain-containing protein; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.955
A0A183TG23
Uncharacterized protein.
    
 
 0.950
TR97037
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.949
SSLN_LOCUS2608
RPOLD domain-containing protein.
    
  0.949
A0A183THP4
RPOL4c domain-containing protein.
    
  0.949
A0A183TNI9
Uncharacterized protein.
    
  0.949
Your Current Organism:
Schistocephalus solidus
NCBI taxonomy Id: 70667
Other names: S. solidus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.