STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A183TBG1Reverse transcriptase domain-containing protein. (468 aa)    
Predicted Functional Partners:
SSLN_LOCUS7870
GP-PDE domain-containing protein.
    
  0.576
A0A183TLT7
Uncharacterized protein.
    
 0.556
A0A3P7CUK9
Uncharacterized protein.
    
 0.556
RL40
Ubiquitin-60S ribosomal protein L40.
    
  0.520
RL21
60S ribosomal protein L21.
   
   0.518
RS27A
Ubiquitin-40S ribosomal protein S27a.
    
  0.517
SSLN_LOCUS1446
Uncharacterized protein.
   
   0.491
A0A3P7DFG5
Ribosomal_L2_C domain-containing protein.
   
 
 0.477
SSLN_LOCUS735
Metallophos domain-containing protein.
    
  0.474
A0A3P7CKY2
Mre11_DNA_bind domain-containing protein.
    
  0.474
Your Current Organism:
Schistocephalus solidus
NCBI taxonomy Id: 70667
Other names: S. solidus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.