STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A183TCY2Uncharacterized protein. (1119 aa)    
Predicted Functional Partners:
A0A183TNA0
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.987
SSLN_LOCUS956
Small nuclear ribonucleoprotein Sm D3.
   
 0.986
SSLN_LOCUS9427
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.985
A0A183TBX1
Small nuclear ribonucleoprotein Sm D2.
   
 0.985
A0A3P7EJ46
Sm domain-containing protein.
   
 0.985
A0A183T2C3
Uncharacterized protein.
   
 0.983
SSLN_LOCUS8720
Nuclear cap-binding protein subunit 2.
    
 0.981
A0A183T8U6
Sm domain-containing protein.
   
 0.980
A0A3P7CKJ9
Sm domain-containing protein.
   
 0.980
SSLN_LOCUS210
SF3b1 domain-containing protein.
   
 0.971
Your Current Organism:
Schistocephalus solidus
NCBI taxonomy Id: 70667
Other names: S. solidus
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