STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A183TDE1Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (219 aa)    
Predicted Functional Partners:
SSLN_LOCUS536
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.999
SSLN_LOCUS7308
Uncharacterized protein.
    
  0.979
SSLN_LOCUS1202
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
   
  0.979
A0A183T3M1
Nucleolar protein 6.
   
 0.968
A0A183TBA9
Uncharacterized protein.
   
 0.950
SSLN_LOCUS6257
Utp21 domain-containing protein.
   
 
 0.949
IMP3
U3 small nucleolar ribonucleoprotein IMP3.
   
   0.922
A0A183T594
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
   0.922
IMP4
U3 small nucleolar ribonucleoprotein IMP4.
   
   0.919
SSLN_LOCUS957
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
    
   0.919
Your Current Organism:
Schistocephalus solidus
NCBI taxonomy Id: 70667
Other names: S. solidus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.