STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSLN_LOCUS378Uncharacterized protein. (432 aa)    
Predicted Functional Partners:
A0A183TG23
Uncharacterized protein.
   
 0.999
SSLN_LOCUS6495
WD_REPEATS_REGION domain-containing protein.
    
 0.985
SSLN_LOCUS1202
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
   
 0.985
SSLN_LOCUS7308
Uncharacterized protein.
   
 0.984
A0A183T8J9
RNA polymerase II-associated factor 1 homolog.
   
 0.972
A0A3P7ELR8
Uncharacterized protein.
   
 0.972
SSLN_LOCUS6834
Transcription elongation factor spt6; Transcription elongation factor that enhances transcription elongation by RNA polymerase II (RNAPII). Belongs to the SPT6 family.
   
 0.971
SSLN_LOCUS9349
Uncharacterized protein.
    
 0.969
SSLN_LOCUS2608
RPOLD domain-containing protein.
  
 0.965
A0A183TN74
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.965
Your Current Organism:
Schistocephalus solidus
NCBI taxonomy Id: 70667
Other names: S. solidus
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