STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3P7EFC1Ubiquitin carboxyl-terminal hydrolase. (533 aa)    
Predicted Functional Partners:
A0A183TFL7
SAGA-associated factor 29 homolog.
   
 0.995
A0A183TD81
Transcription initiation factor TFIID subunit 10.
    
 0.991
SSLN_LOCUS7022
Uncharacterized protein.
    
 0.991
SSLN_LOCUS4166
Uncharacterized protein.
    
 0.990
SSLN_LOCUS5696
TFIID_20kDa domain-containing protein.
    
 0.988
SSLN_LOCUS848
SAGA-associated factor 11; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription.
    
 0.986
SSLN_LOCUS3064
N-acetyltransferase domain-containing protein.
    
 0.985
A0A3P7D5D3
Bromo domain-containing protein.
    
 0.985
A0A3P7CH14
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]
    
 0.979
RS27A
Ubiquitin-40S ribosomal protein S27a.
    
 0.978
Your Current Organism:
Schistocephalus solidus
NCBI taxonomy Id: 70667
Other names: S. solidus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.