STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3P7EQ65Uncharacterized protein. (1719 aa)    
Predicted Functional Partners:
SSLN_LOCUS6257
Utp21 domain-containing protein.
   
 0.998
A0A3P7EFW8
WD_REPEATS_REGION domain-containing protein.
   
 0.998
SSLN_LOCUS3700
WD_REPEATS_REGION domain-containing protein.
   
 0.997
A0A183T3M1
Nucleolar protein 6.
   
 0.996
A0A183T638
Nop domain-containing protein.
   
 0.996
SSLN_LOCUS4202
WD_REPEATS_REGION domain-containing protein.
   
 0.995
A0A183TEL8
WD_REPEATS_REGION domain-containing protein.
   
 0.995
SSLN_LOCUS5468
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.994
SSLN_LOCUS9630
WD_REPEATS_REGION domain-containing protein.
   
 0.994
SSLN_LOCUS3036
Uncharacterized protein.
   
 0.992
Your Current Organism:
Schistocephalus solidus
NCBI taxonomy Id: 70667
Other names: S. solidus
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