STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139W8V3Uncharacterized protein. (220 aa)    
Predicted Functional Partners:
D2A381_TRICA
Putative ATP-dependent RNA helicase me31b-like Protein; Belongs to the DEAD box helicase family.
  
 
 0.550
D2A4U7_TRICA
Small nuclear ribonucleoprotein Sm D3.
   
 0.536
D6WJA5_TRICA
DNA-directed RNA polymerases I, II, and III subunit RPABC2-like Protein.
  
 
 0.519
D6WRZ6_TRICA
Heterogeneous nuclear ribonucleoprotein K-like Protein.
    
 0.519
D2A664_TRICA
Putative ATP-dependent RNA helicase DHX34-like Protein.
   
 
 0.517
D2A4Q8_TRICA
PID domain-containing protein.
   
 0.512
D6WML7_TRICA
Small nuclear ribonucleoprotein F-like Protein; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
  0.505
D1ZZ96_TRICA
40S ribosomal protein S12, mitochondrial-like Protein; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.499
D6WCS4_TRICA
40S ribosomal protein S23-like Protein; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.499
D6X2J3_TRICA
Small nuclear ribonucleoprotein G.
    
  0.494
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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