STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139WAM3RBR-type E3 ubiquitin transferase. (396 aa)    
Predicted Functional Partners:
A0A139WAJ9
E3 ubiquitin-protein ligase RNF19A-like Protein.
 
     0.946
D2A4Q0_TRICA
Ubiquitin-conjugating enzyme E2-18 kDa-like Protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.619
D6WQ00_TRICA
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.594
D6X2L3_TRICA
Gamma-glutamylcyclotransferase-like Protein.
    
 0.585
D2A1G0_TRICA
Ubiquitin-60S ribosomal protein L40-like Protein.
    
  0.572
D6WWI2_TRICA
Uncharacterized protein.
   
 0.488
A0A139WLR9
Uncharacterized protein.
    
 0.451
D6WFP4_TRICA
Uncharacterized protein.
    
 0.451
D6WFP5_TRICA
Uncharacterized protein.
    
 0.451
D6WL56_TRICA
NEDD8-like Protein.
    
 0.450
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.