STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139WAS6Uncharacterized protein. (347 aa)    
Predicted Functional Partners:
D6WA18_TRICA
Leucine-rich repeat serine/threonine-protein kinase 1-like Protein.
   
 0.591
A0A139WL82
Muscle M-line assembly protein unc-89-like Protein.
   
 0.480
A0A139WLU9
Tyrosine-protein kinase-like otk; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.443
D6W9T6_TRICA
Myosin light chain alkali-like Protein.
   
   0.429
D6W9T7_TRICA
Myosin light chain alkali-like Protein.
   
   0.429
D6WH20_TRICA
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
    
 
 0.429
PEVK
Twitchin-like Protein.
   
 0.421
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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