STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139WEA2ATP-dependent RNA helicase p62-like Protein; Belongs to the DEAD box helicase family. (632 aa)    
Predicted Functional Partners:
D2A2M4_TRICA
Protein flightless-1-like Protein.
    
 0.720
D6X3X5_TRICA
Leucine-rich repeat protein soc-2 homolog-like Protein.
    
 0.720
D6WAF3_TRICA
Decaprenyl-diphosphate synthase subunit 1-like Protein; Belongs to the FPP/GGPP synthase family.
   
  
 0.707
D6WA23_TRICA
Neurocalcin homolog-like Protein.
    
 
 0.695
D6WBB4_TRICA
Frequenin-1-like Protein.
    
 
 0.695
A0A139WNS8
SLIT-ROBO Rho GTPase-activating protein 1-like Protein.
      
 0.655
A0A139WC98
Calcium homeostasis endoplasmic reticulum protein-like Protein.
    
 0.646
Vsx
Visual system homeobox 2-like Protein.
      
 0.542
A0A139WIS4
Teneurin-m-like Protein.
      
 0.503
D2A5R4_TRICA
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.503
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.