A0A139WEA7 protein (Tribolium castaneum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A139WEA7

Protein VAC14 homolog-like Protein. (713 aa)

Predicted Functional Partners:

D2A1F9_TRICA

0.982

D6WE46_TRICA

0.982

D6WV89_TRICA

0.928

D2A5V0_TRICA

0.899

D6WVG2_TRICA

0.811

D6W9A3_TRICA

0.725

D6WN21_TRICA

0.720

D6WRB7_TRICA

0.643

D6X2A3_TRICA

0.575

D6WF07_TRICA

0.566

Your Current Organism:

Tribolium castaneum

NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A139WEA7	D2A1F9_TRICA	A0A139WEA7	D2A1F9	Protein VAC14 homolog-like Protein.	Phosphatidylinositide phosphatase SAC1-like Protein.	0.982
A0A139WEA7	D2A5V0_TRICA	A0A139WEA7	D2A5V0	Protein VAC14 homolog-like Protein.	DNA repair and recombination protein RAD54-like.	0.899
A0A139WEA7	D6W9A3_TRICA	A0A139WEA7	D6W9A3	Protein VAC14 homolog-like Protein.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.725
A0A139WEA7	D6WE46_TRICA	A0A139WEA7	D6WE46	Protein VAC14 homolog-like Protein.	Putative 1-phosphatidylinositol 3-phosphate 5-kinase-like Protein.	0.982
A0A139WEA7	D6WF07_TRICA	A0A139WEA7	D6WF07	Protein VAC14 homolog-like Protein.	Suppressor of cytokine signaling 6-like Protein.	0.566
A0A139WEA7	D6WN21_TRICA	A0A139WEA7	D6WN21	Protein VAC14 homolog-like Protein.	Tyrosine--tRNA ligase.	0.720
A0A139WEA7	D6WRB7_TRICA	A0A139WEA7	D6WRB7	Protein VAC14 homolog-like Protein.	Ubiquitin carboxyl-terminal hydrolase.	0.643
A0A139WEA7	D6WV89_TRICA	A0A139WEA7	D6WV89	Protein VAC14 homolog-like Protein.	Deleted in autism protein 1 homolog-like Protein.	0.928
A0A139WEA7	D6WVG2_TRICA	A0A139WEA7	D6WVG2	Protein VAC14 homolog-like Protein.	WD repeat domain phosphoinositide-interacting protein 2-like Protein.	0.811
A0A139WEA7	D6X2A3_TRICA	A0A139WEA7	D6X2A3	Protein VAC14 homolog-like Protein.	Phosphoinositide 3-kinase regulatory subunit 4-like Protein.	0.575
D2A1F9_TRICA	A0A139WEA7	D2A1F9	A0A139WEA7	Phosphatidylinositide phosphatase SAC1-like Protein.	Protein VAC14 homolog-like Protein.	0.982
D2A1F9_TRICA	D6W9A3_TRICA	D2A1F9	D6W9A3	Phosphatidylinositide phosphatase SAC1-like Protein.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.940
D2A1F9_TRICA	D6WE46_TRICA	D2A1F9	D6WE46	Phosphatidylinositide phosphatase SAC1-like Protein.	Putative 1-phosphatidylinositol 3-phosphate 5-kinase-like Protein.	0.999
D2A1F9_TRICA	D6WVG2_TRICA	D2A1F9	D6WVG2	Phosphatidylinositide phosphatase SAC1-like Protein.	WD repeat domain phosphoinositide-interacting protein 2-like Protein.	0.699
D2A5V0_TRICA	A0A139WEA7	D2A5V0	A0A139WEA7	DNA repair and recombination protein RAD54-like.	Protein VAC14 homolog-like Protein.	0.899
D6W9A3_TRICA	A0A139WEA7	D6W9A3	A0A139WEA7	Phosphatidylinositol 3-kinase catalytic subunit type 3.	Protein VAC14 homolog-like Protein.	0.725
D6W9A3_TRICA	D2A1F9_TRICA	D6W9A3	D2A1F9	Phosphatidylinositol 3-kinase catalytic subunit type 3.	Phosphatidylinositide phosphatase SAC1-like Protein.	0.940
D6W9A3_TRICA	D6WE46_TRICA	D6W9A3	D6WE46	Phosphatidylinositol 3-kinase catalytic subunit type 3.	Putative 1-phosphatidylinositol 3-phosphate 5-kinase-like Protein.	0.975
D6W9A3_TRICA	D6WF07_TRICA	D6W9A3	D6WF07	Phosphatidylinositol 3-kinase catalytic subunit type 3.	Suppressor of cytokine signaling 6-like Protein.	0.540
D6W9A3_TRICA	D6WVG2_TRICA	D6W9A3	D6WVG2	Phosphatidylinositol 3-kinase catalytic subunit type 3.	WD repeat domain phosphoinositide-interacting protein 2-like Protein.	0.893