STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139WF14WD repeat, SAM and U-box domain-containing protein 1-like Protein. (1011 aa)    
Predicted Functional Partners:
A0A139WFG6
Tetratricopeptide repeat protein 37-like Protein.
    
 0.698
A0A139WFJ1
Helicase SKI2W-like Protein.
    
 0.687
D6X3J7_TRICA
Parafibromin-like Protein.
    
 0.660
A0A139WMF5
RNA polymerase II-associated factor 1 homolog-like protein.
    
 0.619
D6WKU5_TRICA
Another transcription unit protein-like Protein.
    
 0.586
D6WC33_TRICA
RNA polymerase-associated protein CTR9 homolog-like Protein.
    
 0.584
A0A139WAG9
POC1 centriolar protein homolog-like Protein.
  
 
  0.574
D6WVZ4_TRICA
Cytochrome c-2-like Protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.540
D6WE72_TRICA
Superkiller viralicidic activity 2-like 2.
    
 0.498
D6WFW5_TRICA
Elongation factor 1-alpha 2-like Protein.
    
 0.489
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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