STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139WGR8EF-hand domain-containing family member B-like Protein. (530 aa)    
Predicted Functional Partners:
D6WD92_TRICA
Parkin coregulated gene protein homolog-like Protein.
   
   0.856
D6WML2_TRICA
UPF0468 protein CG5343-like Protein.
    
   0.854
A0A139WBP4
Uncharacterized protein.
   
   0.724
D6WLV6_TRICA
EF-hand domain-containing family member C2-like Protein.
   
   0.721
D6WNG5_TRICA
EF-hand domain-containing protein 1-like Protein.
   
   0.721
D1ZZC6_TRICA
RIB43A-like with coiled-coils protein 2.
   
   0.683
D7EIW3_TRICA
Meiosis-specific nuclear structural protein 1-like Protein.
    
 
 0.682
D6WDU6_TRICA
WD repeat-containing protein 16-like Protein.
   
   0.676
D6WGQ5_TRICA
Tektin-2-like Protein.
   
   0.675
A0A139WIJ3
DUF4812 domain-containing protein.
   
   0.672
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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