STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139WI37Putative glutamate--tRNA ligase, mitochondrial-like Protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (515 aa)    
Predicted Functional Partners:
A0A139WFQ4
Bifunctional glutamate/proline--tRNA ligase-like Protein.
  
 0.988
D7EI38_TRICA
Ribosomal_L7Ae domain-containing protein.
   
 0.952
D6WZR2_TRICA
60S ribosomal protein L23a-like Protein; Belongs to the universal ribosomal protein uL23 family.
   
 0.950
D2A365_TRICA
60S ribosomal protein L21-like Protein.
   
 0.941
D6WVV8_TRICA
60S ribosomal protein L38-like Protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.927
D6WRI6_TRICA
60S ribosomal protein L23-like Protein; Belongs to the universal ribosomal protein uL14 family.
   
 0.925
D2A119_TRICA
60S ribosomal protein L31-like Protein.
   
 0.923
D6X3F5_TRICA
60S ribosomal protein L5-like Protein.
   
 0.923
D6WN21_TRICA
Tyrosine--tRNA ligase.
  
 0.922
D6WMI1_TRICA
Lysine--tRNA ligase.
  
 0.920
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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