STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139WIF9Uncharacterized protein. (1117 aa)    
Predicted Functional Partners:
D6WCL1_TRICA
Uncharacterized protein.
   
 0.993
D6WWG2_TRICA
Structural maintenance of chromosomes protein 2-like Protein.
   
 0.991
SMC4
Structural maintenance of chromosomes protein.
   
 0.972
CAP-D2
Condensin complex subunit 1; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases.
   
  
 0.757
D2A538_TRICA
Structural maintenance of chromosomes protein 3-like Protein.
   
 0.736
D6X4W0_TRICA
Structural maintenance of chromosomes protein.
   
 0.736
D6WRS7_TRICA
Structural maintenance of chromosomes protein 5-like Protein.
   
 0.732
D6WUA4_TRICA
Retinoblastoma family protein-like Protein.
   
 0.718
Smc6
Structural maintenance of chromosomes 6.
   
 0.659
D6WWY2_TRICA
Structural maintenance of chromosomes protein.
   
 0.659
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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