STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139WIP9POU domain protein. (711 aa)    
Predicted Functional Partners:
D6W9I0_TRICA
Cyclin-T-like Protein; Belongs to the cyclin family.
  
  
  0.669
D2A0K2_TRICA
CREB-binding protein-like Protein.
    
 0.658
D7EJW7_TRICA
Uncharacterized protein.
    
  0.652
D6WN74_TRICA
Transcription initiation factor IIB-like Protein.
    
 0.616
D2A5F5_TRICA
Uncharacterized protein.
     
 0.612
D6WCT9_TRICA
snRNA-activating protein complex subunit 3-like Protein.
   
 
  0.611
Schnurri
Schnurri.
    
 0.604
D6W843_TRICA
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
     
 0.595
A0A139WFV6
CYCLIN domain-containing protein; Belongs to the cyclin family.
     
 0.590
D2A0S7_TRICA
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
     
 0.583
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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