STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139WJ75Rhabdoid tumor deletion region protein 1-like Protein. (394 aa)    
Predicted Functional Partners:
D6WDU6_TRICA
WD repeat-containing protein 16-like Protein.
   
 
 0.765
D6WZC8_TRICA
Uncharacterized protein.
    
 
 0.594
A0A139WAG9
POC1 centriolar protein homolog-like Protein.
   
 
 0.547
D6W9F7_TRICA
Protein will die slowly-like Protein.
   
 
 0.547
D6WVP7_TRICA
POC1 centriolar protein homolog-like Protein.
   
 
 0.547
D7EKA1_TRICA
WD_REPEATS_REGION domain-containing protein.
   
 
 0.547
D7EIS9_TRICA
Uncharacterized protein.
      
 0.544
D6WD57_TRICA
Protein MAK16 homolog; Belongs to the MAK16 family.
      
 0.542
D6WLL4_TRICA
Uncharacterized protein.
    
 
 0.528
D6WNT9_TRICA
Uncharacterized protein.
   
    0.506
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.