STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139WJT0SEC14 domain and spectrin repeat-containing protein 1-like Protein. (3128 aa)    
Predicted Functional Partners:
A0A139WG13
PID domain-containing protein.
   
 0.612
D6X3J7_TRICA
Parafibromin-like Protein.
    
 0.523
D6WC33_TRICA
RNA polymerase-associated protein CTR9 homolog-like Protein.
    
 0.512
A0A139WMF5
RNA polymerase II-associated factor 1 homolog-like protein.
    
  0.471
D6WU92_TRICA
Microtubule-associated protein RP/EB family member 1-like Protein.
    
 
 0.456
A0A139WML5
G protein alpha q subunit-like Protein.
   
 0.453
A0A139WCX1
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
      
 0.431
D6WD05_TRICA
Protein crumbs-like Protein.
  
 
  0.430
D6WLL4_TRICA
Uncharacterized protein.
   
 
 0.426
Fra
Frazzled.
    
0.424
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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