A0A139WK09 protein (Tribolium castaneum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A139WK09

Uncharacterized protein. (242 aa)

Predicted Functional Partners:

A0A139W9R6

0.834

Khc

0.557

D6WA18_TRICA

0.554

D6WUV1_TRICA

0.553

D6X531_TRICA

0.553

D6WPU7_TRICA

0.546

D2A649_TRICA

0.542

D6WS99_TRICA

0.531

Tom34

0.530

D6WPY3_TRICA

0.529

Your Current Organism:

Tribolium castaneum

NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A139W9R6	A0A139WK09	A0A139W9R6	A0A139WK09	Uncharacterized protein.	Uncharacterized protein.	0.834
A0A139W9R6	D6WA18_TRICA	A0A139W9R6	D6WA18	Uncharacterized protein.	Leucine-rich repeat serine/threonine-protein kinase 1-like Protein.	0.790
A0A139W9R6	D6X531_TRICA	A0A139W9R6	D6X531	Uncharacterized protein.	Exocyst complex component 4-like Protein.	0.852
A0A139WK09	A0A139W9R6	A0A139WK09	A0A139W9R6	Uncharacterized protein.	Uncharacterized protein.	0.834
A0A139WK09	D2A649_TRICA	A0A139WK09	D2A649	Uncharacterized protein.	Uncharacterized protein.	0.542
A0A139WK09	D6WA18_TRICA	A0A139WK09	D6WA18	Uncharacterized protein.	Leucine-rich repeat serine/threonine-protein kinase 1-like Protein.	0.554
A0A139WK09	D6WPU7_TRICA	A0A139WK09	D6WPU7	Uncharacterized protein.	Uncharacterized protein.	0.546
A0A139WK09	D6WPY3_TRICA	A0A139WK09	D6WPY3	Uncharacterized protein.	Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like Protein.	0.529
A0A139WK09	D6WS99_TRICA	A0A139WK09	D6WS99	Uncharacterized protein.	BTB/POZ domain-containing protein KCTD3-like Protein.	0.531
A0A139WK09	D6WUV1_TRICA	A0A139WK09	D6WUV1	Uncharacterized protein.	Spermatogenesis-associated protein 20-like Protein.	0.553
A0A139WK09	D6X531_TRICA	A0A139WK09	D6X531	Uncharacterized protein.	Exocyst complex component 4-like Protein.	0.553
A0A139WK09	Khc	A0A139WK09	D6X1C8	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.557
A0A139WK09	Tom34	A0A139WK09	D2A586	Uncharacterized protein.	Translocase of outer membrane 34.	0.530
D2A649_TRICA	A0A139WK09	D2A649	A0A139WK09	Uncharacterized protein.	Uncharacterized protein.	0.542
D6WA18_TRICA	A0A139W9R6	D6WA18	A0A139W9R6	Leucine-rich repeat serine/threonine-protein kinase 1-like Protein.	Uncharacterized protein.	0.790
D6WA18_TRICA	A0A139WK09	D6WA18	A0A139WK09	Leucine-rich repeat serine/threonine-protein kinase 1-like Protein.	Uncharacterized protein.	0.554
D6WPU7_TRICA	A0A139WK09	D6WPU7	A0A139WK09	Uncharacterized protein.	Uncharacterized protein.	0.546
D6WPU7_TRICA	D6WUV1_TRICA	D6WPU7	D6WUV1	Uncharacterized protein.	Spermatogenesis-associated protein 20-like Protein.	0.443
D6WPY3_TRICA	A0A139WK09	D6WPY3	A0A139WK09	Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase-like Protein.	Uncharacterized protein.	0.529
D6WS99_TRICA	A0A139WK09	D6WS99	A0A139WK09	BTB/POZ domain-containing protein KCTD3-like Protein.	Uncharacterized protein.	0.531