STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139WK28Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like Protein. (650 aa)    
Predicted Functional Partners:
D6X3W5_TRICA
Pre-mRNA-processing factor 17-like Protein.
   
 0.957
D6WNG6_TRICA
Uncharacterized protein.
    
 0.952
A0A139WKF7
Putative ATP-dependent RNA helicase kurz-like Protein.
 
     0.950
D2A0U2_TRICA
Coiled-coil domain-containing protein 94-like Protein.
   
 0.945
D6WVD0_TRICA
Pre-mRNA-splicing factor Syf2-like Protein.
    
 0.941
D6WAL4_TRICA
Pre-mRNA-splicing factor Slu7-like Protein.
   
 0.939
D6WZL8_TRICA
Cwf21 domain-containing protein.
    
 0.921
A0A139WHY2
Pre-mRNA-splicing factor SYF1-like Protein.
   
 0.904
A0A139WNM0
Putative U5 small nuclear ribonucleoprotein 200 kDa helicase-like Protein.
    
 
 0.899
D6X4C5_TRICA
Cell division cycle 5-like protein.
 
 
 0.898
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.