STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139WK89Heterogeneous nuclear ribonucleoprotein C-like Protein. (310 aa)    
Predicted Functional Partners:
D6WRZ6_TRICA
Heterogeneous nuclear ribonucleoprotein K-like Protein.
   
 0.938
D6WB34_TRICA
Heterogeneous nuclear ribonucleoprotein 87F-like Protein.
   
 0.923
D2A664_TRICA
Putative ATP-dependent RNA helicase DHX34-like Protein.
   
 0.714
D6X226_TRICA
CUGBP Elav-like family member 1.
    
 
 0.656
Lwr
Lesswright; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.567
D6WIW0_TRICA
Eukaryotic translation initiation factor 2 subunit 2-like Protein.
     
 0.560
D6WM37_TRICA
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requ [...]
    
 0.503
D6X2J3_TRICA
Small nuclear ribonucleoprotein G.
   
 0.494
D6X384_TRICA
Histone H2A deubiquitinase MYSM1-like Protein.
    
 0.488
Bgcn
Benign gonial cell neoplasm.
   
 0.471
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.