STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139WMC8E3 ubiquitin-protein ligase RNF149-like Protein. (123 aa)    
Predicted Functional Partners:
D6WC47_TRICA
Endoplasmic reticulum lectin 1-like Protein.
    
 0.702
D6WR54_TRICA
Spastin-like Protein; Belongs to the AAA ATPase family.
    
 0.676
D6WPF8_TRICA
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.622
D6WY45_TRICA
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.622
D2A1M7_TRICA
Transitional endoplasmic reticulum ATPase TER94-like Protein.
    
 0.618
TER94
Transitional endoplasmic reticulum ATPase TER94; Belongs to the AAA ATPase family.
    
 0.618
Crl
Courtless; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.557
A0A139WBC4
Uncharacterized protein.
    
 0.502
A0A139WGN6
Uncharacterized protein.
    
 0.502
D6WTA7_TRICA
Protein sel-1 homolog 1-like Protein.
    
 0.502
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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